Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS23201.1 | SDS36473.1 | SAMN04489812_1283 | SAMN04489812_1689 | Major Facilitator Superfamily protein. | Predicted arabinose efflux permease, MFS family. | 0.659 |
SDS23201.1 | SDT37936.1 | SAMN04489812_1283 | SAMN04489812_5497 | Major Facilitator Superfamily protein. | Predicted arabinose efflux permease, MFS family. | 0.713 |
SDS36473.1 | SDS23201.1 | SAMN04489812_1689 | SAMN04489812_1283 | Predicted arabinose efflux permease, MFS family. | Major Facilitator Superfamily protein. | 0.659 |
SDS36473.1 | SDS36508.1 | SAMN04489812_1689 | SAMN04489812_1690 | Predicted arabinose efflux permease, MFS family. | Glucose/arabinose dehydrogenase, beta-propeller fold; Manually curated. | 0.480 |
SDS36473.1 | SDS44736.1 | SAMN04489812_1689 | SAMN04489812_1933 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.740 |
SDS36473.1 | SDT35255.1 | SAMN04489812_1689 | SAMN04489812_5342 | Predicted arabinose efflux permease, MFS family. | Transmembrane secretion effector. | 0.586 |
SDS36473.1 | SDT37936.1 | SAMN04489812_1689 | SAMN04489812_5497 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.770 |
SDS36508.1 | SDS36473.1 | SAMN04489812_1690 | SAMN04489812_1689 | Glucose/arabinose dehydrogenase, beta-propeller fold; Manually curated. | Predicted arabinose efflux permease, MFS family. | 0.480 |
SDS44736.1 | SDS36473.1 | SAMN04489812_1933 | SAMN04489812_1689 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.740 |
SDT35255.1 | SDS36473.1 | SAMN04489812_5342 | SAMN04489812_1689 | Transmembrane secretion effector. | Predicted arabinose efflux permease, MFS family. | 0.586 |
SDT35255.1 | SDT37936.1 | SAMN04489812_5342 | SAMN04489812_5497 | Transmembrane secretion effector. | Predicted arabinose efflux permease, MFS family. | 0.621 |
SDT37936.1 | SDS23201.1 | SAMN04489812_5497 | SAMN04489812_1283 | Predicted arabinose efflux permease, MFS family. | Major Facilitator Superfamily protein. | 0.713 |
SDT37936.1 | SDS36473.1 | SAMN04489812_5497 | SAMN04489812_1689 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.770 |
SDT37936.1 | SDT35255.1 | SAMN04489812_5497 | SAMN04489812_5342 | Predicted arabinose efflux permease, MFS family. | Transmembrane secretion effector. | 0.621 |