STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS38429.1DNA-binding transcriptional regulator, ArsR family. (109 aa)    
Predicted Functional Partners:
SDS38402.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.857
SDS40808.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.774
SDS38367.1
Hypothetical protein.
       0.773
SDS10783.1
DNA-binding transcriptional regulator, ArsR family; Manually curated.
  
     0.661
SDS38339.1
Hypothetical protein.
       0.516
SDS10439.1
DNA-binding transcriptional regulator, ArsR family.
  
    0.489
SDS38470.1
Predicted arabinose efflux permease, MFS family.
       0.462
SDS13173.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
    0.410
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.