STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS38774.1AraC-type DNA-binding protein. (304 aa)    
Predicted Functional Partners:
SDT25531.1
AraC-like ligand binding domain-containing protein.
  
 
   0.792
SDS43474.1
AraC-type DNA-binding protein.
  
     0.768
SDS08418.1
AraC-type DNA-binding protein.
  
     0.767
SDS76727.1
AraC-type DNA-binding protein.
  
     0.763
SDT36680.1
AraC-type DNA-binding protein.
  
     0.760
SDT29754.1
AraC family transcriptional regulator, arabinose operon regulatory protein.
  
     0.754
SDT22101.1
AraC-type DNA-binding protein.
  
     0.753
SDT27656.1
Helix-turn-helix domain-containing protein.
  
     0.753
SDS86251.1
AraC-type DNA-binding protein.
  
     0.751
SDS60752.1
AraC-type DNA-binding protein.
  
     0.740
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.