STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS41376.1Hypothetical protein. (625 aa)    
Predicted Functional Partners:
SDS41414.1
Transcriptional regulator, LacI family.
 
     0.747
SDS31199.1
alpha-N-arabinofuranosidase.
  
     0.691
SDS19080.1
Beta-L-arabinofuranosidase, GH127.
 
     0.678
SDT26843.1
alpha-N-arabinofuranosidase.
  
     0.674
SDT31486.1
alpha-N-arabinofuranosidase.
  
     0.674
SDS96777.1
alpha-N-arabinofuranosidase.
  
     0.646
SDS17614.1
alpha-N-arabinofuranosidase.
  
     0.620
SDR84010.1
alpha-N-arabinofuranosidase.
  
     0.617
SDS41190.1
alpha-N-arabinofuranosidase.
  
     0.608
SDS41316.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.543
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.