STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS70584.1Rifampin ADP-ribosylating transferase. (136 aa)    
Predicted Functional Partners:
SDT24999.1
Hypothetical protein.
 
      0.896
SDT24213.1
Transferase hexapeptide (six repeat-containing protein).
 
      0.784
SDT04479.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.720
SDS70612.1
DNA-binding transcriptional regulator, ArsR family.
  
    0.531
SDS70633.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
       0.528
SDS70543.1
Hypothetical protein.
       0.421
SDS70564.1
MFS transporter, CP family, cyanate transporter.
       0.421
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.