STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS80061.1Arylsulfatase A. (478 aa)    
Predicted Functional Partners:
SDS57960.1
Arylsulfatase A.
  
     0.774
SDR84145.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   0.647
SDS79997.1
Glyoxylase, beta-lactamase superfamily II.
       0.518
SDS80028.1
S-(hydroxymethyl)mycothiol dehydrogenase.
       0.518
SDT17147.1
Protein of unknown function.
  
     0.445
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.408
SDT21586.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.400
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.