STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS80613.1Methyltransferase domain-containing protein. (291 aa)    
Predicted Functional Partners:
SDS80583.1
DNA-binding transcriptional activator of the SARP family.
 
    0.746
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.659
rpmD
Large subunit ribosomal protein L30.
   
   0.608
SDR82338.1
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.576
SDS79488.1
Uridine kinase.
  
     0.534
SDS88013.1
Surfactin synthase thioesterase subunit.
  
     0.481
SDS80520.1
Creatinine amidohydrolase.
       0.461
SDS80553.1
FCD domain-containing protein.
       0.461
SDT40747.1
Glutamate synthase (NADH) large subunit.
       0.444
SDS94058.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
     0.433
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.