STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS90341.1ABC-type multidrug transport system, ATPase component. (282 aa)    
Predicted Functional Partners:
SDS90363.1
Hypothetical protein.
 
     0.958
SDS25834.1
Cytochrome c-type biogenesis protein CcsB.
  
 0.953
SDS44771.1
Cytochrome c-type biogenesis protein CcsB.
  
 0.953
SDS90308.1
RecB family nuclease, putative, TM0106 family.
 
     0.837
SDS12402.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
  
     0.690
SDS31435.1
Hypothetical protein.
  
     0.637
SDS56435.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.570
SDS00005.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.526
SDT28195.1
Protein of unknown function DUF58.
  
    0.520
tatA-2
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
     0.519
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.