STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS93053.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
SDS93075.1
N-succinyldiaminopimelate aminotransferase.
       0.773
SDS93027.1
Regulator of RNase E activity RraA.
       0.513
SDS92971.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.473
SDS92993.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
       0.473
SDS93102.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.461
SDS93120.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.461
SDS93149.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.461
SDS92944.1
Transcriptional regulator, IclR family.
       0.459
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.