STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT06524.1Lysophospholipase L1. (385 aa)    
Predicted Functional Partners:
SDT06515.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.825
SDT06483.1
Nucleoside-diphosphate-sugar epimerase.
       0.603
SDS53788.1
Hypothetical protein.
   
  0.492
SDS53901.1
Hypothetical protein.
   
  0.492
SDT34855.1
MT0933-like antitoxin protein.
   
  0.492
SDT44491.1
Hypothetical protein.
   
  0.492
SDS50354.1
Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
   
  0.466
SDS50385.1
Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
   
  0.466
SDS64463.1
Heparinase II/III-like protein.
   
  0.466
SDR92693.1
Hypothetical protein.
  
     0.465
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.