STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT07578.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
SDT07554.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.823
SDT07509.1
Hypothetical protein.
       0.801
SDT07608.1
Hypothetical protein.
       0.773
SDT07624.1
Acyl-CoA dehydrogenase.
       0.701
SDT07435.1
Small integral membrane protein.
       0.590
SDT07484.1
Hypothetical protein.
       0.581
SDT07462.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.568
SDT07417.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.524
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.