STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT08792.1Protein of unknown function. (411 aa)    
Predicted Functional Partners:
SDT29637.1
Peptidase family M48.
  
     0.547
SDS71724.1
Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase.
  
 
   0.510
SDS06698.1
Protein of unknown function.
  
     0.468
SDS05985.1
Hypothetical protein.
  
     0.465
SDS45161.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
  
     0.437
SDS43837.1
Hypothetical protein.
  
     0.422
SDS76372.1
Hypothetical protein.
  
     0.416
SDT08826.1
Quinol monooxygenase YgiN.
       0.412
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.