STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT09670.1Fumarylacetoacetate (FAA) hydrolase family protein. (408 aa)    
Predicted Functional Partners:
SDT09597.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.802
SDS56033.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
  0.718
SDT23278.1
NADP-dependent aldehyde dehydrogenase.
 
  
  0.702
SDT09565.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
    
  0.695
SDS84925.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
     0.545
ilvD
Dihydroxy-acid dehydratase; Manually curated; Belongs to the IlvD/Edd family.
    
  0.538
ilvD-2
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
    
  0.538
xylB-2
D-xylulose kinase/2-phosphoglycolate phosphatase,TIGR01449.
       0.535
SDT09682.1
DNA-binding transcriptional regulator, FadR family.
 
     0.534
SDS54730.1
Gluconolactonase.
 
     0.462
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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