STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT12554.1Hydroxypyruvate isomerase; Belongs to the hyi family. (273 aa)    
Predicted Functional Partners:
SDT12450.1
2-hydroxy-3-oxopropionate reductase.
 
  0.820
SDS23421.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
  
  
 
0.726
SDR89731.1
3-hydroxyisobutyrate dehydrogenase.
 
 
  0.660
SDT35544.1
2-hydroxy-3-oxopropionate reductase.
 
 
  0.615
SDT12572.1
Beta-galactosidase trimerisation domain-containing protein.
 
     0.611
SDR86456.1
3-hydroxyisobutyrate dehydrogenase.
 
 
  0.607
SDT12524.1
DNA-binding transcriptional regulator, GntR family.
       0.601
SDS63520.1
3-hydroxyisobutyrate dehydrogenase; Manually curated.
 
 
  0.568
SDR89771.1
Hypothetical protein; Manually curated.
 
 
  0.534
xylB
Xylulokinase.
     
  0.499
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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