Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS60304.1 | SDS87401.1 | SAMN04489812_2417 | SAMN04489812_3323 | Glycosyl transferase family 2; Manually curated. | Hypothetical protein. | 0.773 |
SDS60304.1 | SDT14417.1 | SAMN04489812_2417 | SAMN04489812_4311 | Glycosyl transferase family 2; Manually curated. | Uncharacterized membrane-anchored protein. | 0.781 |
SDS60304.1 | SDT14444.1 | SAMN04489812_2417 | SAMN04489812_4312 | Glycosyl transferase family 2; Manually curated. | Copper transport outer membrane protein, MctB. | 0.756 |
SDS60304.1 | SDT14473.1 | SAMN04489812_2417 | SAMN04489812_4313 | Glycosyl transferase family 2; Manually curated. | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase. | 0.789 |
SDS60304.1 | SDT14488.1 | SAMN04489812_2417 | SAMN04489812_4314 | Glycosyl transferase family 2; Manually curated. | Putative peptidoglycan lipid II flippase. | 0.673 |
SDS60304.1 | SDT14980.1 | SAMN04489812_2417 | SAMN04489812_4335 | Glycosyl transferase family 2; Manually curated. | Protein of unknown function. | 0.775 |
SDS87401.1 | SDS60304.1 | SAMN04489812_3323 | SAMN04489812_2417 | Hypothetical protein. | Glycosyl transferase family 2; Manually curated. | 0.773 |
SDS87401.1 | SDT14417.1 | SAMN04489812_3323 | SAMN04489812_4311 | Hypothetical protein. | Uncharacterized membrane-anchored protein. | 0.808 |
SDS87401.1 | SDT14444.1 | SAMN04489812_3323 | SAMN04489812_4312 | Hypothetical protein. | Copper transport outer membrane protein, MctB. | 0.811 |
SDS87401.1 | SDT14473.1 | SAMN04489812_3323 | SAMN04489812_4313 | Hypothetical protein. | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase. | 0.820 |
SDS87401.1 | SDT14488.1 | SAMN04489812_3323 | SAMN04489812_4314 | Hypothetical protein. | Putative peptidoglycan lipid II flippase. | 0.771 |
SDS87401.1 | SDT14980.1 | SAMN04489812_3323 | SAMN04489812_4335 | Hypothetical protein. | Protein of unknown function. | 0.775 |
SDT14417.1 | SDS60304.1 | SAMN04489812_4311 | SAMN04489812_2417 | Uncharacterized membrane-anchored protein. | Glycosyl transferase family 2; Manually curated. | 0.781 |
SDT14417.1 | SDS87401.1 | SAMN04489812_4311 | SAMN04489812_3323 | Uncharacterized membrane-anchored protein. | Hypothetical protein. | 0.808 |
SDT14417.1 | SDT14444.1 | SAMN04489812_4311 | SAMN04489812_4312 | Uncharacterized membrane-anchored protein. | Copper transport outer membrane protein, MctB. | 0.992 |
SDT14417.1 | SDT14473.1 | SAMN04489812_4311 | SAMN04489812_4313 | Uncharacterized membrane-anchored protein. | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase. | 0.958 |
SDT14417.1 | SDT14488.1 | SAMN04489812_4311 | SAMN04489812_4314 | Uncharacterized membrane-anchored protein. | Putative peptidoglycan lipid II flippase. | 0.934 |
SDT14417.1 | SDT14980.1 | SAMN04489812_4311 | SAMN04489812_4335 | Uncharacterized membrane-anchored protein. | Protein of unknown function. | 0.797 |
SDT14417.1 | nadK | SAMN04489812_4311 | SAMN04489812_4309 | Uncharacterized membrane-anchored protein. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.645 |
SDT14444.1 | SDS60304.1 | SAMN04489812_4312 | SAMN04489812_2417 | Copper transport outer membrane protein, MctB. | Glycosyl transferase family 2; Manually curated. | 0.756 |
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