STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT19103.1Transcriptional regulator, DeoR family. (269 aa)    
Predicted Functional Partners:
SDS01369.1
Tagatose 6-phosphate kinase.
 
  
 0.875
SDT14070.1
DeoR family transcriptional regulator, fructose operon transcriptional repressor.
  
     0.774
SDR83962.1
Acyl-CoA synthetase (NDP forming).
    
   0.668
SDT19123.1
Multiple sugar transport system substrate-binding protein.
 
     0.578
SDT19146.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.505
SDT19175.1
Multiple sugar transport system permease protein.
       0.505
SDT19229.1
ADP-dependent phosphofructokinase/glucokinase.
 
     0.469
SDT19199.1
Fructose-bisphosphate aldolase, class II.
 
    0.462
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.