STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT19454.1Hypothetical protein. (458 aa)    
Predicted Functional Partners:
SDT19501.1
FAD dependent oxidoreductase.
 
     0.910
SDT19379.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.909
SDT38980.1
Alpha/beta hydrolase family protein.
  
     0.768
SDT21779.1
FAD dependent oxidoreductase.
 
     0.760
SDT19406.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.751
SDT19481.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
       0.737
SDT19432.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.721
SDT21818.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.712
SDS15216.1
Hypothetical protein.
  
     0.698
SDT20876.1
Phosphotransferase enzyme family protein.
  
     0.654
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.