STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT22132.1Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family. (296 aa)    
Predicted Functional Partners:
SDS24863.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.760
SDS58833.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.746
SDT22101.1
AraC-type DNA-binding protein.
 
     0.663
SDT19454.1
Hypothetical protein.
  
     0.620
SDT20876.1
Phosphotransferase enzyme family protein.
  
     0.614
SDT19379.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.608
SDT22148.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.605
SDT22173.1
Putative aldouronate transport system permease protein.
       0.605
SDS67762.1
Protein of unknown function.
  
     0.592
SDR83982.1
Glycosyl hydrolases family 43.
  
     0.533
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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