STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT22481.1Predicted metal-dependent hydrolase, TIM-barrel fold. (285 aa)    
Predicted Functional Partners:
SDT22507.1
4,5-dihydroxyphthalate decarboxylase.
 
     0.902
SDS84925.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
     0.736
SDS77880.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.729
SDT11236.1
Ferredoxin-NADP reductase.
     
 0.729
SDT22471.1
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
 
     0.704
SDS24920.1
D-threo-aldose 1-dehydrogenase.
 
  
  0.673
SDT22449.1
4-oxalmesaconate hydratase.
 
  
  0.648
SDR99175.1
D-threo-aldose 1-dehydrogenase.
 
  
  0.560
SDT22520.1
Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.547
SDR85664.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.541
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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