STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT24835.1MarR family protein. (240 aa)    
Predicted Functional Partners:
SDS91888.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.557
SDS68001.1
DNA-binding transcriptional regulator YbjK.
  
     0.539
SDT24821.1
Glycosyl hydrolases family 43.
       0.520
SDS75063.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.505
SDT24855.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.495
SDS51782.1
Hypothetical protein.
  
     0.492
SDS07295.1
Helix-turn-helix domain-containing protein; Manually curated.
  
     0.491
SDR89771.1
Hypothetical protein; Manually curated.
  
     0.483
SDR92027.1
Tetracyclin repressor, C-terminal all-alpha domain.
  
     0.471
SDT30162.1
Methyltransferase domain-containing protein.
  
     0.448
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.