STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT31823.1Predicted O-methyltransferase YrrM. (187 aa)    
Predicted Functional Partners:
SDS69206.1
Alanine racemase.
  
     0.739
SDT13232.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
     0.676
SDS04815.1
Hypothetical protein.
  
     0.674
SDS69101.1
Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme).
  
     0.674
SDS42224.1
L,D-transpeptidase catalytic domain.
  
     0.669
SDT05054.1
Hypothetical protein.
  
     0.667
SDT17613.1
Protein of unknown function.
  
     0.653
SDT08706.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
     0.648
SDS31435.1
Hypothetical protein.
  
     0.629
SDS87984.1
Amino acid adenylation domain-containing protein.
    
 0.601
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.