STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT33054.1Coenzyme F420-0:L-glutamate ligase. (248 aa)    
Predicted Functional Partners:
SDT08437.1
LPPG:FO 2-phospho-L-lactate transferase.
 
 
 0.953
SDT33032.1
2'-5' RNA ligase superfamily protein.
       0.773
SDT08414.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
  
  
 
0.772
SDT17673.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.762
SDS05898.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.746
SDT13182.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.739
SDS82294.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.729
SDS26842.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.727
SDS54233.1
Reduced coenzyme F420:NADP oxidoreductase.
 
     0.712
SDS01302.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.691
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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