STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT37817.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family; Non-canonical start codon; manually curated. (263 aa)    
Predicted Functional Partners:
SDS45793.1
Alpha/beta hydrolase family protein.
 
     0.650
SDS05430.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.590
SDS32598.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.590
SDS57621.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.590
SDT35276.1
isopenicillin-N epimerase.
    
   0.590
SDT18687.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.455
SDT37796.1
Hypothetical protein.
       0.455
SDT30876.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
 
     0.429
SDT37838.1
Sugar phosphate isomerase/epimerase.
       0.408
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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