STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT38396.1DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. (448 aa)    
Predicted Functional Partners:
SDT38416.1
4,5-dihydroxyphthalate decarboxylase.
 
     0.813
SDT38447.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.728
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.695
SDT36548.1
2-oxoglutarate dehydrogenase E1 component.
   
 
  0.629
SDT38435.1
Predicted amidohydrolase.
 
     0.625
SDT38459.1
Polar amino acid transport system permease protein.
 
     0.535
SDS87843.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 
  0.415
SDS87865.1
HxxPF-repeated domain-containing protein.
   
 
  0.415
SDS87984.1
Amino acid adenylation domain-containing protein.
   
 
  0.415
SDS88069.1
HxxPF-repeated domain-containing protein.
   
 
  0.415
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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