STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT38447.1Amino acid ABC transporter substrate-binding protein, PAAT family. (320 aa)    
Predicted Functional Partners:
SDT38459.1
Polar amino acid transport system permease protein.
 
  0.967
SDT38416.1
4,5-dihydroxyphthalate decarboxylase.
 
  
  0.911
SDT38465.1
Polar amino acid transport system ATP-binding protein.
 
  0.911
SDR85761.1
Polar amino acid transport system permease protein.
 
  0.851
SDT29938.1
Signal transduction histidine kinase.
    
 0.807
SDR85801.1
Polar amino acid transport system ATP-binding protein.
 
  0.773
SDT38396.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
 
     0.728
SDT38435.1
Predicted amidohydrolase.
 
     0.694
SDS61345.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
 
 0.637
SDT34675.1
Glutamate transport system permease protein.
  
  0.595
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.