STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT42315.1Phenazine biosynthesis protein PhzF family. (277 aa)    
Predicted Functional Partners:
SDT42302.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
 
     0.813
SDT42282.1
Lipoate-protein ligase A.
       0.668
SDT42326.1
L-threonine aldolase.
       0.618
SDT42272.1
Uncharacterized domain 1-containing protein.
 
     0.569
SDS58636.1
Nicotinamidase-related amidase.
    
  0.538
SDT18227.1
Nicotinamidase-related amidase.
    
  0.538
SDT42204.1
Uncharacterized protein.
       0.504
SDT42218.1
Hypothetical protein.
       0.504
larC
Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
       0.504
SDT42255.1
Predicted oxidoreductase of the aldo/keto reductase family.
       0.504
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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