STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT43970.1Alpha-L-rhamnosidase N-terminal domain-containing protein. (762 aa)    
Predicted Functional Partners:
SDT43952.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
       0.645
SDS67323.1
Arylsulfatase A.
 
      0.635
SDT44491.1
Hypothetical protein.
  
     0.589
SDS81646.1
Putative collagen-binding domain of a collagenase.
  
     0.587
SDT36400.1
Hypothetical protein.
  
     0.578
SDS54438.1
Alpha/beta hydrolase fold; Manually curated.
  
   0.577
SDS94322.1
Putative collagen-binding domain of a collagenase.
  
     0.577
SDS62636.1
Arylsulfatase A.
 
      0.573
SDT22252.1
Protein of unknown function.
  
     0.549
SDT15593.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
   0.528
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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