STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT44290.1Putative aldouronate transport system substrate-binding protein. (550 aa)    
Predicted Functional Partners:
SDT17073.1
Putative aldouronate transport system permease protein.
  
  0.830
SDS90067.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.806
SDR83759.1
Multiple sugar transport system permease protein.
  
  0.803
SDT27744.1
Multiple sugar transport system permease protein.
  
  0.803
SDT21689.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.795
SDS93711.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.790
SDT17048.1
Putative aldouronate transport system permease protein.
 
  
  0.788
SDT44276.1
Heparinase II/III-like protein.
       0.773
SDT21662.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
  0.768
SDR83714.1
Putative aldouronate transport system permease protein.
 
  
  0.762
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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