STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT44545.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (238 aa)    
Predicted Functional Partners:
SDT44535.1
Signal transduction histidine kinase.
  0.978
SDT29938.1
Signal transduction histidine kinase.
  
0.977
SDS41773.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.931
SDS84625.1
Two-component system, OmpR family, sensor kinase.
 0.915
SDS79678.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.908
SDT23761.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.904
SDS03414.1
Signal transduction histidine kinase.
  0.895
SDR92336.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.891
SDT00869.1
PAS domain S-box-containing protein.
 
  0.869
SDR98079.1
Signal transduction histidine kinase.
 
  0.856
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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