STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT44987.1Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1112 aa)    
Predicted Functional Partners:
SDT45009.1
Formate dehydrogenase iron-sulfur subunit.
 0.999
SDT45020.1
Formate-dependent nitrite reductase, membrane component NrfD.
 
  
 0.981
SDT40747.1
Glutamate synthase (NADH) large subunit.
  
 0.952
SDS12531.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
 
 0.916
SDS74708.1
Selenocysteine-specific elongation factor.
   
 
 0.912
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.912
SDS92725.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.894
SDT44178.1
Respiratory nitrate reductase beta subunit.
   
 0.893
SDT45154.1
Selenocysteine-specific elongation factor.
 
   
 0.828
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.824
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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