STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT46385.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
SDT46398.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  0.997
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.992
SDS77318.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.990
SDS98839.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.987
SDS98765.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.963
SDT09714.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.963
SDS16955.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.960
SDS77269.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.954
SDS15733.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
  0.910
SDS15776.1
Ribose transport system ATP-binding protein.
 
  0.900
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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