STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ACV7CAP-Gly domain-containing protein. (83 aa)    
Predicted Functional Partners:
A0A2P5CZU6
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.619
A0A2P5CZU9
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.619
A0A2P5FXM2
Small GTPase superfamily, ARF type; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.547
A0A2P5F2I8
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 
 0.546
A0A2P5AMA9
Coatomer beta subunit.
    
 0.539
A0A2P5CLJ8
Coatomer beta subunit.
    
 0.539
A0A2P5EKW8
Tubulin-specific chaperone C.
      
 0.485
A0A2P5F7W9
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
    0.473
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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