STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5AHX5Protein UPSTREAM OF FLC. (449 aa)    
Predicted Functional Partners:
A0A2P5F203
WW domain containing protein.
  
     0.523
A0A2P5F9B9
Lectin domain containing protein.
  
     0.501
A0A2P5FP25
Protein translocase subunit.
  
     0.496
A0A2P5D0J3
Eisosome protein.
  
     0.488
A0A2P5CYP4
Transcription repressor OFP.
  
     0.482
TorLOX4
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
   
    0.474
A0A2P5EP55
Pectinesterase inhibitor domain containing protein.
  
     0.460
TorNUP133
Nucleoporin.
  
     0.457
A0A2P5ELF3
Uncharacterized protein.
  
     0.451
TorLOX6
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
   
    0.446
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.