STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5AJ61Membrane insertase. (567 aa)    
Predicted Functional Partners:
A0A2P5EIY8
Tim44-like domain containing protein.
   
 
 0.841
A0A2P5FDG4
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
   
 0.830
A0A2P5FL10
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
   
 0.830
A0A2P5FL50
Uncharacterized protein.
   
 0.830
A0A2P5FNJ9
Signal recognition particle, SRP54 subunit.
   
 
 0.740
A0A2P5FYK6
COX15/CtaA family.
     
 0.717
A0A2P5F551
Peptide chain release factor class I/class II.
  
 
 0.708
A0A2P5EJ40
Mog1/PsbP, alpha/beta/alpha sandwich.
   
 
 0.682
A0A2P5E8N5
Ribosomal protein.
   
 
 0.669
A0A2P5EKV1
Ribosomal protein.
   
 
 0.669
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.