STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5API9Tetratricopeptide-like helical domain containing protein. (1103 aa)    
Predicted Functional Partners:
A0A2P5AYU0
Plant organelle RNA recognition domain containing protein.
  
   
 0.546
A0A2P5EI25
RNA-binding, CRM domain containing protein.
      
 0.495
A0A2P5BP89
RAP domain containing protein.
  
     0.480
A0A2P5EZG4
LRR domain containing protein.
  
     0.472
A0A2P5E4F0
Pentatricopeptide repeat.
  
     0.471
A0A2P5EH47
Mitochodrial transcription termination factor.
  
 
   0.457
A0A2P5FBL3
Plant organelle RNA recognition domain containing protein.
  
     0.448
A0A2P5D0G7
Uncharacterized protein.
  
     0.439
A0A2P5EBU0
Uncharacterized protein.
  
     0.437
A0A2P5FJ46
Octamer-binding transcription factor.
  
   0.431
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.