STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5AQ67Ribosomal protein. (474 aa)    
Predicted Functional Partners:
A0A2P5BKD3
PB1 domain containing protein.
  
     0.515
A0A2P5C4H9
LRR domain containing protein.
  
     0.493
A0A2P5CR97
Uncharacterized protein.
  
     0.492
A0A2P5C4G8
NB-ARC domain containing protein.
  
     0.480
A0A2P5EPR5
NPH3 domain containing protein; Belongs to the NPH3 family.
  
     0.465
TorBZIP7
Basic-leucine zipper transcription factor.
  
     0.463
A0A2P5CU20
Uncharacterized protein.
  
     0.462
A0A2P5APX1
Protein kinase C-like, phorbol ester/diacylglycerol-binding domain containing protein.
  
     0.455
A0A2P5BFT3
Chalcone isomerase.
  
     0.452
A0A2P5F9R2
Son of sevenless protein.
  
     0.444
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.