STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorGPAT1Phospholipid/glycerol acyltransferase. (510 aa)    
Predicted Functional Partners:
A0A2P5F0B4
SGNH hydrolase-type esterase domain containing protein.
  
     0.521
A0A2P5CWD4
Expansin/Lol pI.
  
 
   0.519
TorSCL35
GRAS transcription factor; Belongs to the GRAS family.
  
     0.516
A0A2P5FF40
Uncharacterized protein.
  
     0.516
A0A2P5DIF6
Expansin/Lol pI.
  
 
   0.511
A0A2P5CMF2
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
 
   0.507
TorNSP2
Nodulation signaling pathway 2; Belongs to the GRAS family.
  
   
 0.505
A0A2P5DKH1
Uncharacterized protein.
  
     0.502
A0A2P5FGX3
LRR domain containing protein.
  
 
   0.502
A0A2P5E9T9
Uncharacterized protein.
  
     0.500
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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