STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ARN0Hopanoid-associated sugar epimerase. (849 aa)    
Predicted Functional Partners:
A0A2P5BZU2
Succinylglutamate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.967
A0A2P5EPL1
PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related.
  
 
 0.954
A0A2P5DVR4
Diaminopimelate decarboxylase.
  
 
 0.948
A0A2P5ARU6
Saccharopine dehydrogenase, C-terminal.
 
     0.932
A0A2P5AME2
Ureohydrolase; Belongs to the arginase family.
    
 0.900
A0A2P5FXD5
Diaminopimelate epimerase.
    
 0.887
A0A2P5EG93
UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase.
     
 0.885
A0A2P5G008
CofH family.
   
 
 0.874
A0A2P5DVT3
Diaminopimelate decarboxylase.
  
 
 0.863
A0A2P5EC95
PLP-binding barrel.
  
 
 0.863
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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