Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5AME2 | A0A2P5ARN0 | Ureohydrolase; Belongs to the arginase family. | Hopanoid-associated sugar epimerase. | 0.900 |
A0A2P5AME2 | A0A2P5ARU6 | Ureohydrolase; Belongs to the arginase family. | Saccharopine dehydrogenase, C-terminal. | 0.900 |
A0A2P5AME2 | A0A2P5BZU2 | Ureohydrolase; Belongs to the arginase family. | Succinylglutamate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.592 |
A0A2P5AME2 | A0A2P5DVR4 | Ureohydrolase; Belongs to the arginase family. | Diaminopimelate decarboxylase. | 0.868 |
A0A2P5AME2 | A0A2P5DVT3 | Ureohydrolase; Belongs to the arginase family. | Diaminopimelate decarboxylase. | 0.838 |
A0A2P5AME2 | A0A2P5EC95 | Ureohydrolase; Belongs to the arginase family. | PLP-binding barrel. | 0.838 |
A0A2P5ARN0 | A0A2P5AME2 | Hopanoid-associated sugar epimerase. | Ureohydrolase; Belongs to the arginase family. | 0.900 |
A0A2P5ARN0 | A0A2P5ARU6 | Hopanoid-associated sugar epimerase. | Saccharopine dehydrogenase, C-terminal. | 0.932 |
A0A2P5ARN0 | A0A2P5BZU2 | Hopanoid-associated sugar epimerase. | Succinylglutamate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.967 |
A0A2P5ARN0 | A0A2P5DVR4 | Hopanoid-associated sugar epimerase. | Diaminopimelate decarboxylase. | 0.948 |
A0A2P5ARN0 | A0A2P5DVT3 | Hopanoid-associated sugar epimerase. | Diaminopimelate decarboxylase. | 0.863 |
A0A2P5ARN0 | A0A2P5EC95 | Hopanoid-associated sugar epimerase. | PLP-binding barrel. | 0.863 |
A0A2P5ARN0 | A0A2P5EG93 | Hopanoid-associated sugar epimerase. | UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase. | 0.885 |
A0A2P5ARN0 | A0A2P5EPL1 | Hopanoid-associated sugar epimerase. | PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related. | 0.954 |
A0A2P5ARN0 | A0A2P5FXD5 | Hopanoid-associated sugar epimerase. | Diaminopimelate epimerase. | 0.887 |
A0A2P5ARN0 | A0A2P5G008 | Hopanoid-associated sugar epimerase. | CofH family. | 0.874 |
A0A2P5ARU6 | A0A2P5AME2 | Saccharopine dehydrogenase, C-terminal. | Ureohydrolase; Belongs to the arginase family. | 0.900 |
A0A2P5ARU6 | A0A2P5ARN0 | Saccharopine dehydrogenase, C-terminal. | Hopanoid-associated sugar epimerase. | 0.932 |
A0A2P5ARU6 | A0A2P5BZU2 | Saccharopine dehydrogenase, C-terminal. | Succinylglutamate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
A0A2P5ARU6 | A0A2P5DVR4 | Saccharopine dehydrogenase, C-terminal. | Diaminopimelate decarboxylase. | 0.773 |
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