STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5B5B3Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
A0A2P5FBV3
HAUS augmin-like complex subunit.
    
  0.678
A0A2P5FFU9
Nuclear pore localization protein Npl.
    
 
 0.609
A0A2P5EIC9
26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit.
   
 
 0.559
A0A2P5ET57
Uncharacterized protein.
  
     0.524
A0A2P5FPV1
Chromatin assembly factor 1 subunit A.
  
     0.507
A0A2P5EG57
UBX domain-containing protein.
    
   0.506
A0A2P5F0J9
UBX domain containing protein.
    
   0.506
A0A2P5E6M9
ABC transporter A family protein.
  
     0.505
A0A2P5FFG6
Uncharacterized protein.
  
     0.504
A0A2P5FJ91
Phosphorelay protein.
  
     0.504
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.