STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5B5V3Hydroxyproline-rich glycoprotein family protein. (507 aa)    
Predicted Functional Partners:
A0A2P5FC83
Regulator of nonsense transcript protein.
  
     0.506
A0A2P5BCW0
Uncharacterized protein.
  
     0.484
A0A2P5CLK6
Small auxin-up RNA.
  
     0.483
A0A2P5F835
Uncharacterized protein.
  
     0.472
A0A2P5EB55
PHD finger-like protein.
  
     0.468
A0A2P5FBY9
Uncharacterized protein.
  
     0.460
A0A2P5FN17
Uncharacterized protein.
  
     0.459
A0A2P5FL02
DUF641 domain-containing protein.
  
     0.457
A0A2P5E9U7
Remorin, C-terminal.
  
     0.456
A0A2P5FAD5
Cystic fibrosis transmembrane conductance regulator.
  
     0.454
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.