STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5B985Plastid lipid-associated protein/fibrillin conserved domain containing protein. (308 aa)    
Predicted Functional Partners:
A0A2P5EMX3
Uncharacterized protein.
    
  0.696
A0A2P5CTU8
D-aminoacyl-tRNA deacylase, archaea.
    
 0.655
A0A2P5BQ40
Dihydroneopterin triphosphate diphosphatase.
   
 0.611
A0A2P5EBL2
mRNA-decapping enzyme subunit.
    
 0.570
A0A2P5CGR3
Uncharacterized protein.
  
 
  0.527
A0A2P5FA26
Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase.
    
  0.524
A0A2P5BVR1
Exosome complex RNA-binding protein 1/RRP40/RRP.
    
 0.515
A0A2P5C9M1
CCR4-NOT transcription complex subunit.
    
 
 0.510
A0A2P5FYT1
Exosome complex component CSL.
     
 0.487
A0A2P5E8G0
Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase.
    
  0.474
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.