STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5BF07Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
A0A2P5FYL7
Rx_N domain-containing protein.
  
     0.503
A0A2P5EE91
Uncharacterized protein.
  
     0.485
A0A2P5FSU4
Avr9/Cf-9 rapidly elicited protein.
  
     0.481
A0A2P5A6T0
Eisosome protein.
  
     0.478
A0A2P5CPK7
DNA (Cytosine-5)-methyltransferase 1, replication foci domain containing protein.
  
     0.470
A0A2P5EI75
Rx_N domain-containing protein.
  
     0.470
A0A2P5FEW3
Uncharacterized protein.
  
     0.469
A0A2P5BL65
Transmembrane protein.
  
     0.466
A0A2P5BUS6
Phloem protein.
  
     0.466
A0A2P5EYW6
Agenet domain containing protein.
  
     0.464
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.