STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5BL85P-loop containing nucleoside triphosphate hydrolase. (337 aa)    
Predicted Functional Partners:
A0A2P5EA38
LRR domain containing protein.
  
 
   0.591
A0A2P5DMF6
Peroxidase.
  
   0.581
A0A2P5G0I8
Tyrosine-protein kinase.
  
 
   0.579
A0A2P5C8D7
Protein kinase-like domain containing protein.
  
   0.568
A0A2P5FJ61
Nuclear cap-binding protein subunit 2.
    
 0.567
A0A2P5F858
Peroxidase.
  
   0.563
A0A2P5FIP4
Nuclear cap-binding protein subunit.
    
 0.560
A0A2P5EG00
Ubiquitin-fold modifier-conjugating enzyme.
  
   0.558
A0A2P5C2N5
F-box domain containing protein.
  
 
 0.554
A0A2P5F9A6
PLAC8 motif-containing protein.
  
 
   0.554
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.