Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5AMJ1 | A0A2P5BM39 | Pheophorbide a oxygenase. | Short-chain dehydrogenase/reductase. | 0.725 |
A0A2P5AMJ1 | A0A2P5CDM2 | Pheophorbide a oxygenase. | Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.689 |
A0A2P5AMJ1 | A0A2P5EEB3 | Pheophorbide a oxygenase. | Chlorophyllase. | 0.617 |
A0A2P5AMJ1 | A0A2P5EHP1 | Pheophorbide a oxygenase. | Aromatic-ring-hydroxylating dioxygenase, alpha subunit. | 0.524 |
A0A2P5AMJ1 | A0A2P5F320 | Pheophorbide a oxygenase. | Chlorophyll synthase. | 0.613 |
A0A2P5AMJ1 | A0A2P5F349 | Pheophorbide a oxygenase. | Peptidase M24, methionine aminopeptidase. | 0.406 |
A0A2P5AMJ1 | A0A2P5FAV7 | Pheophorbide a oxygenase. | Coenzyme F420 hydrogenase, subunit beta. | 0.574 |
A0A2P5AMJ1 | A0A2P5FI79 | Pheophorbide a oxygenase. | Magnesium-protoporphyrin IX methyltransferase. | 0.510 |
A0A2P5BM39 | A0A2P5AMJ1 | Short-chain dehydrogenase/reductase. | Pheophorbide a oxygenase. | 0.725 |
A0A2P5BM39 | A0A2P5CDM2 | Short-chain dehydrogenase/reductase. | Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.964 |
A0A2P5BM39 | A0A2P5DVU2 | Short-chain dehydrogenase/reductase. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.817 |
A0A2P5BM39 | A0A2P5EEB3 | Short-chain dehydrogenase/reductase. | Chlorophyllase. | 0.912 |
A0A2P5BM39 | A0A2P5EHP1 | Short-chain dehydrogenase/reductase. | Aromatic-ring-hydroxylating dioxygenase, alpha subunit. | 0.975 |
A0A2P5BM39 | A0A2P5F320 | Short-chain dehydrogenase/reductase. | Chlorophyll synthase. | 0.978 |
A0A2P5BM39 | A0A2P5F349 | Short-chain dehydrogenase/reductase. | Peptidase M24, methionine aminopeptidase. | 0.717 |
A0A2P5BM39 | A0A2P5F6I6 | Short-chain dehydrogenase/reductase. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.817 |
A0A2P5BM39 | A0A2P5FAV7 | Short-chain dehydrogenase/reductase. | Coenzyme F420 hydrogenase, subunit beta. | 0.972 |
A0A2P5BM39 | A0A2P5FI79 | Short-chain dehydrogenase/reductase. | Magnesium-protoporphyrin IX methyltransferase. | 0.758 |
A0A2P5CDM2 | A0A2P5AMJ1 | Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Pheophorbide a oxygenase. | 0.689 |
A0A2P5CDM2 | A0A2P5BM39 | Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase/reductase. | 0.964 |
page 1 of 5