STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorBHLH41Basic helix-loop-helix transcription factor. (359 aa)    
Predicted Functional Partners:
A0A2P5FG40
Uncharacterized protein.
  
     0.466
A0A2P5EQZ3
SAWADEE domain containing protein.
  
     0.463
A0A2P5ARH6
RNA-binding, CRM domain containing protein.
  
     0.454
A0A2P5E6Q3
Plasminogen activator inhibitor.
  
     0.453
A0A2P5DHW4
Uncharacterized protein.
  
     0.448
A0A2P5E7R6
Lateral organ boundaries domain containing protein.
  
     0.444
TorZnF24
Zinc finger transcription factor.
  
     0.419
A0A2P5CY89
Uncharacterized protein.
  
     0.412
A0A2P5F408
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
  
     0.400
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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