STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5C175ABC transporter-like; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1368 aa)    
Predicted Functional Partners:
A0A2P5FUW8
Coatomer beta subunit.
     
 0.839
A0A2P5FYK6
COX15/CtaA family.
    
 0.618
A0A2P5FA28
Bacterial periplasmic spermidine/putrescine-binding protein.
   
 
  0.580
A0A2P5B4D4
Methyltransferase domain containing protein.
      
 0.558
A0A2P5EHU0
S-adenosyl-L-methionine-dependent methyltransferase.
      
 0.558
A0A2P5FKE2
Serine/threonine protein kinase.
      
 0.558
A0A2P5EGV8
GIY-YIG nuclease superfamily.
      
 0.557
A0A2P5BDQ5
E3 ubiquitin-protein ligase SIN-like.
      
 0.556
A0A2P5CX79
Voltage dependent potassium channel.
      
 0.556
A0A2P5FCG7
Methyltransferase type.
      
 0.495
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.