STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5C4N6G10 protein. (145 aa)    
Predicted Functional Partners:
A0A2P5CVD0
Isy1-like splicing.
   
 0.979
A0A2P5E7I9
Splicing factor-like protein.
   
 0.978
A0A2P5FSR8
SKI-interacting protein, SKIP.
    
 0.976
A0A2P5G0W1
Signal transduction response regulator.
    
 0.976
A0A2P5EA98
Signal transduction response regulator.
    
 0.949
A0A2P5EAC3
Uncharacterized protein.
    
 0.949
A0A2P5CC75
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.940
A0A2P5EU85
mRNA splicing factor SYF.
   
 
 0.940
A0A2P5ES20
Guanine nucleotide-binding protein, beta subunit.
   
 
 0.938
A0A2P5EUN2
Armadillo-type fold containing protein.
   
 
 0.938
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.