Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5ADV7 | A0A2P5BT01 | Spatacsin. | F-box domain containing protein. | 0.470 |
A0A2P5ADV7 | A0A2P5C4S7 | Spatacsin. | IQ motif, EF-hand binding site. | 0.423 |
A0A2P5ADV7 | A0A2P5FJT5 | Spatacsin. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.460 |
A0A2P5BT01 | A0A2P5ADV7 | F-box domain containing protein. | Spatacsin. | 0.470 |
A0A2P5BT01 | A0A2P5C4S7 | F-box domain containing protein. | IQ motif, EF-hand binding site. | 0.440 |
A0A2P5BT01 | A0A2P5ED23 | F-box domain containing protein. | Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal. | 0.467 |
A0A2P5BT01 | A0A2P5FFZ0 | F-box domain containing protein. | Octamer-binding transcription factor. | 0.491 |
A0A2P5BT01 | A0A2P5FJT5 | F-box domain containing protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.558 |
A0A2P5BT01 | A0A2P5FLX5 | F-box domain containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.580 |
A0A2P5BT01 | A0A2P5G1B0 | F-box domain containing protein. | Nucleoporin. | 0.523 |
A0A2P5C4S7 | A0A2P5ADV7 | IQ motif, EF-hand binding site. | Spatacsin. | 0.423 |
A0A2P5C4S7 | A0A2P5BT01 | IQ motif, EF-hand binding site. | F-box domain containing protein. | 0.440 |
A0A2P5C4S7 | A0A2P5CU12 | IQ motif, EF-hand binding site. | IQ motif, EF-hand binding site. | 0.422 |
A0A2P5C4S7 | A0A2P5EAW3 | IQ motif, EF-hand binding site. | IQ motif, EF-hand binding site. | 0.422 |
A0A2P5C4S7 | A0A2P5ED23 | IQ motif, EF-hand binding site. | Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal. | 0.421 |
A0A2P5C4S7 | A0A2P5FFZ0 | IQ motif, EF-hand binding site. | Octamer-binding transcription factor. | 0.463 |
A0A2P5C4S7 | A0A2P5FJT5 | IQ motif, EF-hand binding site. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.468 |
A0A2P5C4S7 | A0A2P5FLX5 | IQ motif, EF-hand binding site. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.492 |
A0A2P5C4S7 | A0A2P5FWE7 | IQ motif, EF-hand binding site. | IQ motif, EF-hand binding site. | 0.489 |
A0A2P5C4S7 | A0A2P5G1B0 | IQ motif, EF-hand binding site. | Nucleoporin. | 0.428 |
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