STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CA79Glycoside hydrolase; Belongs to the glycosyl hydrolase 17 family. (317 aa)    
Predicted Functional Partners:
A0A2P5DXR0
Coatomer beta subunit.
    
 0.785
A0A2P5CTT9
DnaJ domain containing protein.
   
 0.767
A0A2P5F5L8
SNF5/SMARCB1/INI.
   
 0.767
A0A2P5DFW3
P53 negative regulator.
   
 0.758
A0A2P5FC71
P53 negative regulator.
   
 0.758
A0A2P5CP29
Glycoside hydrolase; Belongs to the glycosyl hydrolase 3 family.
    
  0.701
A0A2P5CP45
Glycoside hydrolase; Belongs to the glycosyl hydrolase 3 family.
    
  0.701
A0A2P5BI53
Zinc finger, PHD-type domain containing protein.
    
 0.683
A0A2P5E2U2
Zinc finger, FYVE/PHD-type domain containing protein.
    
 0.683
A0A2P5EDC3
Galactose mutarotase, N-terminal barrel.
     
 0.680
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.