STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CCK1Kelch-type beta propeller. (283 aa)    
Predicted Functional Partners:
A0A2P5EAV4
F-box domain containing protein.
  
 
   0.515
A0A2P5EAY9
F-box domain containing protein.
  
 
   0.515
A0A2P5EB17
F-box domain containing protein.
  
 
   0.508
A0A2P5CKF5
F-box domain containing protein.
  
 
   0.497
A0A2P5ETZ0
Cytochrome P450 family protein.
  
     0.485
A0A2P5F2Q6
Uncharacterized protein.
  
     0.466
A0A2P5FJ58
F-box domain containing protein.
  
 
   0.466
A0A2P5FV72
Transmembrane protein.
  
     0.466
A0A2P5E6N3
Ubiquitin.
    
 0.446
A0A2P5EBD9
Ubiquitin domain containing protein.
    
 0.446
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.